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Bacteriophage T4 Head: Structure, Assembly, and Genome Packaging
- Published: 2023/02
- Authors: Venigalla B. Rao, Andrei Fokine, Qianglin Fang, …
- DOI: 10.3390/v15020527
- Publication: Viruses. 2023 Feb; 15(2): 527.
Bacteriophage (phage) T4 has served as an extraordinary model to elucidate biological structures and mechanisms. Recent discoveries on the T4 head (capsid) structure, portal vertex, and genome packaging add a significant body of new literature to phage biology. Head structures in unexpanded and expa...DNA Packaging in Bacteriophage T4 - Madame Curie …
WEBPhage T4, with its large genome (171 kb), complex genetic make-up and rich details of head morphogenesis, provides an excellent, though challenging, model system to elucidate the molecular details of the DNA …
The headful packaging nuclease of bacteriophage T4
WEBAug 5, 2008 — Most tailed bacteriophages and herpes viruses replicate genome as a concatemer which is cut by a ‘headful’ nuclease upon completion of genome …
- Author: Tanfis I. Alam, Bonnie Draper, Kiran Kondabagil, Francisco J. Rentas, Manjira Ghosh-Kumar, Siyang Su...
- Publish Year: 2008
- Studies of T4 Genome Headful
Structure, Assembly, and DNA Packaging of the Bacteriophage …
WEBPhage T4 continues to serve as an excellent model to elucidate the mechanisms of head structure, assembly, and DNA packaging not only of myoviridae but of other large …
- Author: Lindsay W. Black, Venigalla B. Rao
- DOI: 10.1016/B978-0-12-394621-8.00018-2
- Publish Year: 2012
- Published: 2012
WEBHere, the catalytic centre of phage T4 headful nuclease, present in the C-terminal domain of ‘large terminase’ gp17, has been defined by muta-tional, biochemical and structural …
- Author: Tanfis I. Alam, Bonnie Draper, Kiran Kondabagil, Francisco J. Rentas, Manjira Ghosh-Kumar, Siyang Su...
- Publish Year: 2008
Structure and assembly of bacteriophage T4 head
WEBDec 3, 2010 — The structure of Ip1*, one of the components of the core, has been determined, which provided insights on how IPs protect T4 genome against the E. coli …
A Promiscuous DNA Packaging Machine from …
WEBFeb 15, 2011 — We found that the phage T4 packaging machine is highly promiscuous, translocating DNA into finished phage heads as well as into proheads. Optical tweezers experiments show that single motors can …
Defining the Bacteriophage T4 DNA Packaging Machine: …
WEBNov 14, 2003 — Phage T4 is referred to as a "strictly headful packaging phage", since it packages headfuls of DNA (∼102% genome length) that are cut from a complex, …
Regulation by interdomain communication of a headful packaging …
WEBA series of cuts follow the encapsidation of each unit-length 'headful' genome, but the mechanisms by which cutting is coupled to packaging are not understood. Here we …
Design of bacteriophage T4-based artificial viral vectors for …
WEBMay 30, 2023 — The gene for the protein-of-interest (POI) is inserted into T4 genome by replacing the non-essential ipI, ipII, and ipIII genes by CRISPR engineering.
Single phage T4 DNA packaging motors exhibit large …
WEBOct 23, 2007 — T4 is also the prototype for a majority of viruses that package DNA by a headful mechanism (4) and lacks the unusual RNA component found in the φ29 motor (1). Several recent advances make T4 an …
Bacteriophage T4 Escapes CRISPR Attack by Minihomology …
WEBJun 22, 2021 — We discovered a counterdefense mechanism evolved by phage T4 to stitch back the broken genomes and restore viral infection. In this process, a small amount of …
Bacteriophage T4 genome - PubMed
WEBPhage T4 has provided countless contributions to the paradigms of genetics and biochemistry. Its complete genome sequence of 168,903 bp encodes about 300 gene …
Headful DNA packaging: Bacteriophage SPP1 as a model system
WEBMay 1, 2013 — When a threshold amount of DNA, representing about 103% of the SPP1 genome, has been packaged (headful) a sequence-independent DNA cleavage …
Regulation by interdomain communication of a headful packaging …
WEBNov 24, 2010 — A series of cuts follow the encapsidation of each unit-length ‘headful’ genome, but the mechanisms by which cutting is coupled to packaging are not …
Temporal epigenome modulation enables efficient bacteriophage ...
WEB2 days ago — Author summary Bacteriophages, viruses that target bacteria, hold substantial promise for applications in biotechnological and medical settings. A comprehensive …
Sequence characteristics of T4-like bacteriophage IME08 …
WEBApr 27, 2011 — Although the T4-like phage genome is also packaged in a headful mode, the terminal ends appear to be generated at random sequences across the genome[12,13]. …
Human Smc5/6 recognises transcription-generated positive DNA …
WEB1 day ago — The study reveals a novel relationship between the human Smc5/6 complex and DNA topology during transcription and emphasizes the …
Headful packaging revisited: the packaging of more than one DNA ...
WEBMay 26, 1995 — Abstract. Like a variety of other bacteriophages, such as T4 and P22, bacteriophage P1 packages DNA by a "headful" mechanism in which the capacity of the …
Intact Genomics - Higher Quality Enzymes and Competent Cells
WEBThis enables robust production and rapid identification of fungal secondary metabolite compounds. Intact Genomics provides the highest quality enzymes, competent cells, …
Determining DNA Packaging Strategy by Analysis of the Termini …
WEBWhen DNA has filled the procapsid, a second nucleolytic cut (the “headful” cleavage) is made by terminase, which releases the packaged DNA from the concatemer, thus …
Diverse Head-to-Tail Sequences in the Circular Genome of …
WEB4 days ago — Head-to-tail sequences have been reported in human bocavirus (HBoV) 1-4. To reveal their features and functions, HBoV DNA was screened among respiratory …
The Human Pangenome Project: a global resource to map …
WEBApr 22, 2022 — The human reference genome is the most widely used resource in human genetics and is due for a major update. Its current structure is a linear composite of …
Epigenomic analysis reveals prevalent contribution of …
WEBJun 2, 2022 — We find that TEs contribute substantially to a diverse array of regulatory elements in the zebrafish genome and that 37% of TEs are positioned in active …
Regulation by interdomain communication of a headful packaging …
WEBNov 24, 2010 — A series of cuts follow the encapsidation of each unit-length ‘headful’ genome, but the mechanisms by which cutting is coupled to packaging are not …
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