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- The circular genome of the plastids is similar to the genome of the prokaryotic cyanobacteria, although much smaller, supporting the endosymbiotic theory (Section 1.3). The DNA of the plastid genome is abbreviated as ctDNA (chloroplast) or ptDNA (plastid).www.sciencedirect.com/topics/agricultural-and-biological-sciences/plastid-genome
Plastid genomes: Current Biology - Cell Press
Apr 23, 2018 · Like those of cyanobacteria, plastid genomes (sometimes called plastomes) typically map as circular molecules tightly packed with genes. In vivo, however, plastid DNAs may exist as linear and/or complex branched forms, …
Genomic Insights into Plastid Evolution - PMC
Over 4,000 plastid genomes have now been sequenced from a wide diversity of photosynthetic and secondarily nonphotosynthetic eukaryotes. Together with nuclear genome sequences, these data have made it possible to investigate …
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Plastid Genome - an overview | ScienceDirect Topics
The plastid genome (ptDNA) of higher plants encodes only ∼114 genes most of which are photosynthetic genes and genes required for plastid maintenance. In addition, ∼10% of …
The plastid genome of twenty-two species from Ferula, Talassia, …
- In this study, we implemented a comprehensive comparative analysis of 22 plastomes from Ferula, Talassia, and Soranthus. All plastomes possessed a typical circular tetrad structure with two inverted repeat regions, one SSC region, and one LSC region, which is common in other plants [44,45,46]. Additionally, the gene numbers, type and distribution o...
Strategies for complete plastid genome sequencing - PMC
Plastid sequencing is an essential tool in the study of plant evolution. This high‐copy organelle is one of the most technically accessible regions of the genome, and its sequence conservation …
Plastid Genome Assembly Using Long-read data - PMC
Aug 1, 2023 · Plastid genomes (plastomes) are highly conserved, comprising linear, branched or occasionally circular molecules that usually contain a large, inverted repeat (IR) and large and …
Structure, function, and inheritance of plastid genomes
Jan 1, 2007 · Plastids (chloroplasts) possess their own genetic information and consequently, express heritabletraits. The plastid genome (plastome) occurs at high copy numbers, with up …
Plastid genome sequencing, comparative …
Plastid genome (plastome) sequence information is of central importance to tracing the evolutionary history of plastids and their hosts. The small genome size and high copy number per cell …
The evolution of the plastid genomes in the …
1 day ago · The family exhibits multiple gene and intron losses, and a broad range of scenarios regarding the evolution of the plastid trnE, a gene considered essential because of its dual function in tetrapyrrole biosynthesis and …
Plastid Genomes - SpringerLink
Jun 15, 2017 · The first complete plastid genome sequences were published in 1986. Since then, more than 30 genomes from embryophytes and eukaryotic algae have been deciphered. The …
Strategies for complete plastid genome sequencing - PubMed
Plastid sequencing is an essential tool in the study of plant evolution. This high-copy organelle is one of the most technically accessible regions of the genome, and its sequence conservation …
Plastid Genome - an overview | ScienceDirect Topics
The plastid genome is a circular double-stranded DNA of 107–218 kb, encoding approximately 130 genes related to photosynthesis, gene transcription and translation (Zimorski et al., 2014). …
Genomic Insights into Plastid Evolution | Genome Biology and …
May 13, 2020 · Over 4,000 plastid genomes have now been sequenced from a wide diversity of photosynthetic and secondarily nonphotosynthetic eukaryotes. Together with nuclear genome …
Plastid Genome Assembly Using Long-read data - PubMed
We demonstrated the efficacy of the ptGAUL pipeline using 16 published long-read data sets. We showed that ptGAUL quickly produces accurate and unbiased assemblies using only ~50× …
Plastid genome (plastome) sequence information is of central importance to tracing the evolutionary his-tory of plastids and their hosts. The small genome size and high copy number …
Plastid Genome - an overview | ScienceDirect Topics
The plastid genome represents an attractive target of genetic engineering in crop plants. Plastid transgenes often give high expression levels, can be stacked in operons and are largely …
Chromosome-level reference genome assembly for the protected …
Mar 19, 2025 · For comparative analysis of the plastid genome, we employed the MAFFT 40 to align our sequence with a published plastid genome of Z. insignis 14 (NC_045299.1) obtained …
Mitochondrial and plastid genome architecture: Reoccurring …
Here, we compare and contrast the breadth of genomic complexity between mitochondrial and plastid chromosomes. Both organelle genomes have independently evolved many of the same …
Plastid genome and its phylogenetic implications of Asiatic
Jan 3, 2024 · The Spiraea plastid genome exhibits typical quadripartite structures and encodes 113–114 genes, including 78–79 protein-coding genes (PCGs), 30 tRNA genes, and 4 rRNA …
Sorting of mitochondrial and plastid heteroplasmy in Arabidopsis …
The size of this population is expected to influence the subsequent genetic dynamics. In Arabidopsis, only a few plastids are present in meristematic cells, while over 50 plastids can …
Identification of plastid genomic regions inferring species identity ...
Oct 26, 2020 · Here, we used high-throughput next-generation sequencing, combined with Sanger sequencing, to construct the plastid genomes of 14 Korean-native Iris species with one …
Brassicales phylogeny inferred from 72 plastid genes: A ... - PubMed
Here we report a complete family-level phylogeny estimated using the plastid genome. Methods: We conducted phylogenetic analyses on a concatenated data set comprising 44,926 bp from …
Unprecedented variation pattern of plastid genomes and the …
Apr 29, 2024 · The plastid, together with the nucleus and mitochondrion, are the three genetic compartments in the plant cell. The plastid genome (plastome) is generally circular in …