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Dealing with multiple sessions adds another layer of complexity, and raises some entirely new issues. This ... Each session uses a character-valued code (the session identifier) in the first column. For demonstration let’s ... in secr ≥ 4.6.2; it is described separately in secr-trend.pdf. msk <-make.mask(traps(ovenCH[[1]]), ...Explore further
WEBMulti-threading is a way to use multiple processor cores to speed computation. secr 4.0 performs multi-threading with ... For one session the array has dimensions n ... (number …
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WEBcapture–recapture models in secr 4.6 Murray Efford 2023-05-21 Contents Introduction 1 When secr.fit fails 2 ... The trapping sessions were only 4 weeks apart in spring 1995. …
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- Most computers these days have multiple processors and these will be used by secr if the user sets ncores greater than one in secr.fit, and some other functions. If then sim.secr ncores = NULL the existing value from the environment variable RCPP_PARALLEL_NUM_THREADS is used (see ). setNumThreads Functions , , and are an alternative way to take adv...
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WEBA study may include multiple sessions. All detections are placed in one file and sessions are distinguished by ... sex may use alphanumeric codes (e.g., ‘F’, ‘M’; quotes not …
session: Session Vector in secr: Spatially Explicit Capture …
WEB6 days ago · For multi-session models the detector array and mask are specified separately for each session. Group models are therefore generally simpler to …
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join: Combine or Split Sessions of capthist Object in secr: …
WEBOct 18, 2023 · Description. Make a single-session capthist object from a list of single-session objects, or a multi-session capthist object. Usage. . join(object, …
ms: Multi-session Objects in secr: Spatially Explicit Capture …
WEBOct 18, 2023 · Multi-session Objects. Description. Logical function to distinguish objects that span multiple sessions. Usage. ## Default S3 method: ms(object, ...) ## S3 method …
WEBsecr-multisession.pdf: multi-session capthist objects and models : secr-noneuclidean.pdf: non-Euclidean distances : secr-parameterisations.pdf: alternative …
WEBNext we fit the simplest possible SECR model with function secr.fit. Setting trace = FALSE suppresses printing of intermediate likelihood evaluations; it doesn’t hurt to leave it out. …
ms function - RDocumentation
WEBms: Multi-session Objects. Description. Logical function to distinguish objects that span multiple sessions. Usage. # S3 method for default. ms(object, ...) # S3 method for …
secr package - RDocumentation
WEBFunctions in secr (4.6.6) Plot usage, detections or sightings. Functions to estimate the density and size of a spatially distributed animal population sampled with an array of …
WEBThis document1 introduces model specification for secr 4.5. What do we mean by ‘models’ here? A family of capture–recapture models (e.g. SECR) may include submodels that …
details function - RDocumentation
WEBThey are described here. Arguments. Detail components. details$autoini specifies the session number from which to compute starting values (multi-session data only; default …
secr-package : Spatially Explicit Capture-Recapture Models
WEBOct 18, 2023 · secr-multisession.pdf: multi-session capthist objects and models : secr-noneuclidean.pdf: non-Euclidean distances : secr-parameterisations.pdf: alternative …
WEBThis document provides an overview of secr 4.5, an R package for spatially explicit capture–recapture analysis (SECR). It includes some background on SECR, an outline …
secr: vignettes/secr-datainput.Rmd - R Package Documentation
WEBOct 18, 2023 · If the study includes multiple sessions and the detector layout or usage varies between sessions then it is necessary to provide session-specific detector …
sim.secr function - RDocumentation
WEBDescription. Simulate a spatially distributed population, sample from that population with an array of detectors, and optionally fit an SECR model to the simulated data. Usage. # S3 …
Cracking the SECR Code: Your Guide to the Streamlined Energy …
WEBImplemented on 1 April 2019, it’s the streamlined successor to its predecessors – the Carbon Reduction Commitment (CRC) Energy Efficiency Scheme and the Carbon …
speed: Speed Tips in secr: Spatially Explicit Capture-Recapture
WEB6 days ago · Suppose you are fitting models to multiple separate datasets that fit the general description of ‘sessions’. If you are fitting separate detection parameters to …
WEBThe R package secrdesign is a set of tools to assist the design of studies using spatially explicit capture– recapture (SECR). It provides convenient wrappers for simulation and …
WEBThis document provides an overview of secr 4.6, an R package for spatially explicit capture–recapture analysis (SECR). It includes some background on SECR, an outline …
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Data input for secr
WEBData input for secr Murray Efford 2024-03-01 Contents Introduction 1 Text formats - general 2 ... A study may include multiple sessions. All detections are placed in one …
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